By prefecture

• Lists of schools in Tokyo
• List of high schools in Chiba Prefecture
• List of junior high schools in Chiba Prefecture
• List of elementary schools in Chiba Prefecture
• List of junior high schools in Kanagawa Prefecture
• List of elementary schools in Kanagawa Prefecture
• List of junior high schools in Saitama Prefecture
• List of elementary schools in Saitama Prefecture

By municipality

• List of schools in Narita, Chiba
• Tokyo is treated as a prefecture
  • List of schools in Adachi, Tokyo
  • List of municipal schools in Shinjuku (for Shinjuku City, Tokyo Metropolis)

By type

• List of international schools in Japan
• List of single gender schools in Japan

Official Japanese schools (certified by Japanese Government)

Public high schools

• Fukui Prefectural School for the Blind
• Fukui Prefectural School for the Deaf
• Yokosuka High School
• Fukuoka Prefectural Fukuoka High School
• Inagakuen Public High School
• Uwajima Fishery High School
• Saga Technical High School

Private high schools

• Chiben Gakuen Middle School (Campuses in Nara and Wakayama)
• Fukuoka Daiichi High School
• Friends School
• Horikoshi High School
• Joshibi High School of Art and Design
• Musashi Junior & Senior High School
• Kaisei Academy
• Yamamura Kokusai High School
• Taku Senior High School
• Seien Girls' High School
• Kobe Ryūkoku Junior High School, High School
• Nada High School
• Keio Shonan-Fujisawa Junior & Senior High School
• Kobe College Senior High School

International schools (not certified by Japanese Government)

• American School in Japan
• Canadian Academy
• Christian Academy in Japan
• Columbia International School
• German School Tokyo Yokohama
• International Christian Academy of Nagoya
• International School of Sacred Heart, Tokyo
• KA International School
• KAIS International School
• KIU Academy, Kyotanabe, Kyoto
• Kyoto International School
• Marist Brothers International School
• New International School (Tokyo), Tokyo
• Nishimachi International School, Tokyo ^[1]
• Osaka International School
• St. Mary's International School
• Saint Maur International School
• Seisen International School, Tokyo
• Tokyo International School
• Tokyo Korean School
• Tokyo West International School
• Tohoku International School
• Tsukuba International School
• Yokohama International School