This workshop will take place on June 6th and 7th, 2024 in collaboration between Wikimedia DE (or WMDE), German chapter of Wikimedia, and doctoral students of the program Network “Metal-Containing Radical Enzymes (MetRaZymes)” funded as Marie Skłodowska-Curie action. The training will be carried out by RudolfSimon, and Ideophagous.
The location is in Stuttgart, Universitätsstrasse 32 (Eingang über Universitätsstr. 34), Room U32.119
The Network MetRaZymes brings together chemists, physicists and biologists for research and training in the field of enzymes and proteins that contain metal ions.[1] This research area is not yet well-covered in Wikipedia, but walks in the steps of other, similar programs around the world. During this two-day workshop, the students will learn how to create and edit relevant Wikipedia entries. This will then be followed by assignments (in collaboration with their Principal investigators) in which the students will have to edit Wikipedia to improve content and/or to create entirely new articles.
The outline of the workshop is as follows:
See: Editing Workshop for the general outline of the editing workshop.
Here is a link to tutorials that can help you edit Wikipedia: Wikipedia:Tutorial and Training Materials.
To be put both directly and between nowiki brackets in order to show the code.
Some articles require infoboxes. Infoboxes always appear on the right hand side of articles, and have to be placed before the rest of the article's text.
This is an example of the chembox (chemical compound infobox) for methane.
| |||
Names | |||
---|---|---|---|
Preferred IUPAC name
Methane[2] | |||
Systematic IUPAC name
Carbane (never recommended[2]) | |||
Other names
| |||
Identifiers | |||
3D model (JSmol)
|
|||
3DMet | |||
1718732 | |||
ChEBI | |||
ChEMBL | |||
ChemSpider | |||
EC Number |
| ||
59 | |||
KEGG | |||
MeSH | Methane | ||
PubChem CID
|
|||
RTECS number |
| ||
UNII | |||
UN number | 1971 | ||
| |||
| |||
Properties | |||
CH4 | |||
Molar mass | 16.043 g·mol−1 | ||
Appearance | Colorless gas | ||
Odor | Odorless | ||
Density | |||
Melting point | −182.456 °C (−296.421 °F; 90.694 K)[4] | ||
Boiling point | −161.5 °C (−258.7 °F; 111.6 K)[4] | ||
Critical point (T, P) | 190.56 K (−82.59 °C; −116.66 °F), 4.5992 MPa (45.391 atm) | ||
22.7 mg/L[5] | |||
Solubility | Soluble in ethanol, diethyl ether, benzene, toluene, methanol, acetone and insoluble in water | ||
log P | 1.09 | ||
Henry's law
constant (kH) |
14 nmol/(Pa·kg) | ||
Conjugate acid | Methanium | ||
Conjugate base | Methyl anion | ||
−17.4×10−6 cm3/mol[6] | |||
Structure | |||
Td | |||
Tetrahedral at carbon atom | |||
0 D | |||
Thermochemistry[7] | |||
Heat capacity (C)
|
35.7 J/(K·mol) | ||
Std molar
entropy (S⦵298) |
186.3 J/(K·mol) | ||
Std enthalpy of
formation (ΔfH⦵298) |
−74.6 kJ/mol | ||
Gibbs free energy (ΔfG⦵)
|
−50.5 kJ/mol | ||
Std enthalpy of
combustion (ΔcH⦵298) |
−891 kJ/mol | ||
Hazards[8] | |||
GHS labelling: | |||
Danger | |||
H220 | |||
P210 | |||
NFPA 704 (fire diamond) | |||
Flash point | −188 °C (−306.4 °F; 85.1 K) | ||
537 °C (999 °F; 810 K) | |||
Explosive limits | 4.4–17% | ||
Related compounds | |||
Related alkanes
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Related compounds
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Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).
|
((Chembox | Verifiedfields = changed | Watchedfields = changed | verifiedrevid = 464371375 | Name = | ImageFile = Methane-2D-dimensions.svg | ImageFile_Ref = ((chemboximage|correct|??)) | ImageSize = 170 | ImageName = Stereo, skeletal formula of methane with some measurements added | ImageFileL1 = Methane-CRC-MW-3D-balls.png | ImageFileL1_Ref = ((chemboximage|correct|??)) | ImageNameL1 = Ball and stick model of methane | ImageFileR1 = Methane-3D-space-filling.svg | ImageFileR1_Ref = ((chemboximage|correct|??)) | ImageNameR1 = Spacefill model of methane | ImageCaptionR1 = ((legend|black|Carbon, C))((legend|white|Hydrogen, H)) | PIN = Methane<ref name=iupac2013>((cite book|title = Nomenclature of Organic Chemistry : IUPAC Recommendations and Preferred Names 2013 (Blue Book)|publisher = [[Royal Society of Chemistry|The Royal Society of Chemistry]]|date = 2014|location = Cambridge|pages = 3–4|doi = 10.1039/9781849733069-FP001|isbn = 978-0-85404-182-4|quote = Methane is a retained name (see P-12.3) that is preferred to the systematic name ‘carbane’, a name never recommended to replace methane, but used to derive the names ‘carbene’ and ‘carbyne’ for the radicals H<sub>2</sub>C<sup>2•</sup> and HC<sup>3•</sup>, respectively.|chapter = Front Matter))</ref> | SystematicName = Carbane (never recommended<ref name=iupac2013 />) | OtherNames = ((ubl|Carbon tetrahydride|Carburetted hydrogen|Hydrogen carbide|Marsh gas|Methyl hydride|Natural gas)) | IUPACName = | Section1 = ((Chembox Identifiers | CASNo = 74-82-8 | CASNo_Ref = ((cascite|correct|CAS)) | UNII_Ref = ((fdacite|correct|FDA)) | UNII = OP0UW79H66 | PubChem = 297 | ChemSpiderID = 291 | ChemSpiderID_Ref = ((chemspidercite|correct|chemspider)) | EINECS = 200-812-7 | UNNumber = 1971 | KEGG = C01438 | KEGG_Ref = ((keggcite|confirmed|kegg)) | MeSHName = Methane | ChEBI = 16183 | ChEBI_Ref = ((ebicite|correct|EBI)) | ChEMBL = 17564 | ChEMBL_Ref = ((ebicite|correct|EBI)) | RTECS = PA1490000 | Beilstein = 1718732 | Gmelin = 59 | 3DMet = B01453 | SMILES = C | StdInChI = 1S/CH4/h1H4 | StdInChI_Ref = ((stdinchicite|correct|chemspider)) | StdInChIKey = VNWKTOKETHGBQD-UHFFFAOYSA-N | StdInChIKey_Ref = ((stdinchicite|correct|chemspider)) )) | Section2 = ((Chembox Properties | C=1 | H=4 | Appearance = Colorless gas | Odor = Odorless | Density = ((ubl|0.657 kg/m<sup>3</sup> (gas, 25 °C, 1 atm)|0.717 kg/m<sup>3</sup> (gas, 0 °C, 1 atm)<ref>((cite web|title=Gas Encyclopedia|url=http://encyclopedia.airliquide.com/Encyclopedia.asp?GasID=41|access-date=November 7, 2013|archive-date=December 26, 2018|archive-url=https://web.archive.org/web/20181226083050/https://encyclopedia.airliquide.com/methane?GasID=41|url-status=live))</ref> | 422.8 g/L (liquid, −162 °C)<ref name=crc>[[#Haynes|Haynes]], p. 3.344</ref> )) | MeltingPtC = −182.456 | BoilingPtC = −161.5 | MeltingPt_ref = <ref name=crc/> | BoilingPt_ref = <ref name=crc/> | CriticalTP = ((cvt|190.56|K)), ((cvt|4.5992|MPa|atm)) | Solubility = 22.7 mg/L<ref>[[#Haynes|Haynes]], p. 5.156</ref> | SolubleOther = Soluble in [[ethanol]], [[diethyl ether]], [[benzene]], [[toluene]], [[methanol]], [[acetone]] and insoluble in [[water]] | ConjugateAcid = [[Methanium]] | ConjugateBase = [[Methyl anion]] | LogP = 1.09 | HenryConstant = 14 nmol/(Pa·kg) | MagSus = −17.4((e|−6)) cm<sup>3</sup>/mol<ref>[[#Haynes|Haynes]], p. 3.578</ref> )) | Section3 = ((Chembox Structure | MolShape = [[Tetrahedral molecular geometry|Tetrahedral]] at [[carbon]] atom | Dipole = 0((nbsp))D | PointGroup = T<sub>d</sub> )) | Section4 = ((Chembox Thermochemistry | Thermochemistry_ref = <ref>[[#Haynes|Haynes]], pp. 5.26, 5.67</ref> | DeltaGfree = −50.5 kJ/mol | DeltaHf = −74.6 kJ/mol | DeltaHc = −891 kJ/mol | Entropy = 186.3 J/(K·mol) | HeatCapacity = 35.7 J/(K·mol) )) | Section7 = ((Chembox Hazards | Hazards_ref = <ref>((cite web|title=Safety Datasheet, Material Name: Methane|url=http://www.chemadvisor.com/Matheson/database/msds/00244226000800003.PDF|publisher=Metheson Tri-Gas Incorporated|access-date=December 4, 2011|location=US|date=December 4, 2009|url-status=dead|archive-url=https://web.archive.org/web/20120604162221/http://www.chemadvisor.com/Matheson/database/msds/00244226000800003.PDF|archive-date=June 4, 2012))</ref> | GHSPictograms = ((GHS02)) | GHSSignalWord = Danger | HPhrases = ((H-phrases|220)) | PPhrases = ((P-phrases|210)) | NFPA-H = 2 | NFPA-F = 4 | NFPA-R = 0 | NFPA-S = SA | FlashPtC = −188 | AutoignitionPtC = 537 | ExploLimits = 4.4–17% ))<ref>((cite web|url=http://cameochemicals.noaa.gov/chemical/8823|title=METHANE|author=NOAA Office of Response and Restoration, US GOV|website=noaa.gov|access-date=March 20, 2015|archive-date=January 9, 2019|archive-url=https://web.archive.org/web/20190109075841/https://cameochemicals.noaa.gov/chemical/8823|url-status=live))</ref> | Section8 = ((Chembox Related | OtherFunction_label = alkanes | OtherFunction = ((ubl|[[Ethane]]|[[Propane]]|[[Butane]])) | OtherCompounds = ((ubl|[[Silane]]|[[Germane]]|[[Stannane]]|[[Plumbane]])) )) ))
Here is the example for human hemoglobin, a protein, on the right hand side is the final result, beneath is the wikicode.
hemoglobin | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
(heterotetramer, (αβ)2) | |||||||||||||
Protein type | metalloprotein, globulin | ||||||||||||
Function | oxygen-transport | ||||||||||||
Cofactor(s) | heme (4) | ||||||||||||
|
((Infobox heteropolypeptide | heteropolymer = hemoglobin | polymer_type = heterotetramer, (αβ)<sub>2</sub> | protein_type = [[metalloprotein]], [[globulin]] | function = [[oxygen]]-transport | cofactors = [[heme]] (4) | image = 1GZX Haemoglobin.png | image_source = Structure of human hemoglobin. <span style="color:red;">'''α'''</span> and <span style="color:blue;">'''β'''</span> subunits are in red and blue, and the iron-containing [[heme]] groups in green. From ((PDB|1GZX)) ((Proteopedia|Hemoglobin)) | SubunitCount = 3 | subunit1 = Hb-α1 | gene1 = [[HBA1]] | locus1 = [[Chromosome 16|Chr. 16]] [https://www.ncbi.nlm.nih.gov/Omim/getmap.cgi?chromosome=16p13.3 p13.3] | subunit2 = Hb-α2 | gene2 = [[HBA2]] | locus2 = [[Chromosome 16|Chr. 16]] [https://www.ncbi.nlm.nih.gov/Omim/getmap.cgi?chromosome=16p13.3 p13.3] | subunit3 = Hb-β | gene3 = [[HBB]] | locus3 = [[Chromosome 11|Chr. 11]] [https://www.ncbi.nlm.nih.gov/Omim/getmap.cgi?chromosome=11p15.5 p15.5] |Formula=C2952 H 4664 O 832 N812 S8 Fe 4|C2952 H 4664 O 832 N812 S8 Fe 4=))
Here is the example for King-Wai Yau, a scientist: final result on the right, wikicode beneath this sentence.
King-Wai Yau | |
---|---|
Born | Guangzhou (Canton), China | October 27, 1948
Citizenship | USA |
Alma mater | Princeton A.B. in physics 1971, Harvard Ph.D in neurobiology 1975 |
Known for | mechanisms of sensory transduction in vision and olfaction |
Scientific career | |
Fields | Neuroscience, Biophysics |
Institutions | Johns Hopkins University, University of Texas Medical Branch |
Academic advisors | John G. Nicholls, Denis A. Baylor, Alan L. Hodgkin |
Website | neuroscience |
((Infobox scientist | name = King-Wai Yau | image = King-Way Yau 2008 ARVO.jpg | alt = photo of King-Wai Yau | caption = King-Wai Yau delivering 2008 Champalimaud Award lecture at ARVO meeting | birth_date = ((Birth date and age|1948|10|27)) | birth_place = Guangzhou (Canton), China | citizenship = USA | nationality = | fields = [[Neuroscience]], [[Biophysics]] | workplaces = [[Johns Hopkins University]], [[University of Texas Medical Branch]] | alma_mater = [[Princeton University|Princeton]] A.B. in physics 1971, [[Harvard]] Ph.D in neurobiology 1975 | known_for = mechanisms of sensory transduction in vision and olfaction | academic_advisors= John G. Nicholls, Denis A. Baylor, [[Alan Lloyd Hodgkin|Alan L. Hodgkin]] | website = ((URL|neuroscience.jhu.edu/KingWaiYau.php)) ))
For biology :
Wikipedia:List_of_infoboxes#Biology
For other topics:
Wikipedia:List_of_infoboxes#Other_science_and_nature
An assertion needs to be backed with a citation. To introduce it in a Wikipedia article, you can rely on the visual editor for most cases (books, websites, articles). In certain cases, you will need to know the wikicode (for citing a thesis, for example). Below is an example of wikicode concerning an article, and further below, the links to the pages explaining how to cite books, websites, and thesis.
To achieve the following note,[10] you can both rely on the visual editor, or use the following wikicode:
<ref> ((cite journal |last = Peyron |first = Marie-Agnès |author2 = Olivier Blanc |author3 = James P. Lund |author4 = Alain Woda |date = 2004-03-09 |title = Influence of Age on Adaptability of Human Mastication |journal = [[Journal of Neurophysiology]] |volume = 92 |issue = 2 |pages = 773–779 |url = http://jn.physiology.org/cgi/content/full/92/2/773 |doi = 10.1152/jn.01122.2003 |pmid = 15277595 )) </ref>
Useful external tool:
Audiovisual media template here
Please post this on the talk pages of biophysics-related articles.
Biophysics Unassessed (inactive) | |||||||
|
Feel free to place this on your user page after joining the project.
((User WikiProject Biophysics))
This user participates in WikiProject Biophysics. |
For a full list, see here.
Students: To contact a helper, here is the link to their talk page:
Topic suggestions:
Suggested sources of media related to Chemistry:
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Wikipedia articles (new, expanded, improved):
To insert your individual username, please choose "Edit source" and replace your name here by this string: *~~~~
Methane is a retained name (see P-12.3) that is preferred to the systematic name 'carbane', a name never recommended to replace methane, but used to derive the names 'carbene' and 'carbyne' for the radicals H2C2• and HC3•, respectively.